Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKGNSTLATTSKNITSGLHFGLVNISGNNESTLNCSQKPSDKHLDAIPILYYIIFVIGFLVNIVVVTLFCCQKGPKKVSSIYIFNLAVADLLLLATLPLWATYYSYRYDWLFGPVMCKVFGSFLTLNMFASIFFITCMSVDRYQSVIYPFLS-QRRNPWQASYIVPLVWCMACLSSLPTFYFRDVRTIEYLGVNACIMAFPPEKYAQWSAGIALMKNILGFIIPLIFIATCY----FGIRKHLLKTNSYGKNRITRDQVLKMAAAVVLAFIICWLPFHVLTFLDALAWMGV-INSCEVIAVIDLALPFAILLGFTNSCVNPFLYCFVGNRFQQKLRSVFRVPITWLQGKRESMSCRKSSSLREMETFVS |
4RWA Chain:A ((124-406)) | ---------------------------------------------AITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMET-WPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRD--GAVVCMLQFPSPSW-YWDTVTKICVFLFAFVVPILIITVCYGLMLL---------GSKEKDRSLR-RITRMVLVVVGAFVVCWAPIHIFVIV----WTLVDIDRRDPLVVA--ALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLC------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -290236 for 2043 contacts (-142.1/contact) +
2D Compatibility (PS) -27279 + (NN) -4763 + (LL) 4932
1D Compatibility (HY) -28000 + (ID) 4650
Total energy: -349996.0 ( -171.31 by residue)
QMean score : 0.268
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