Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEEGGDFDNYYGADNQSECEYTD-WKSSGALIPAIYMLVFLLGTTGNGLVLWTVFRSSREKRRSADIFIASLAVADLTFVVTLPLWATYTYRDYDWPFGTFFCKLSSYLIFVNMYASVFCLTGLSFDRYLAIV----RPVANARLRLRVSGAVATAVLWVLAALLAMPVMVLRTTGDLENTTKVQCYMDYSMVATVSSEWAWEVGLGVSSTTVGFVVPFTIMLTCYFFIAQTIAGHFRKERIEGLRKRRRLLSIIVVLVVTFALCWMPYHL---VKTLYMLGSLLHW---PCDFDLFLMNIFPYCTCISYVNSCLNPFLYAFFDPRFRQACTSMLCCGQSRCAGTSHSSSGEKSASYSSGHSQGPGPNMGKGGEQMHEKSIPYSQETLVVD |
| 4XT3 Chain:A ((26-316)) | -------------EDATPCVFTDVLNQSKPVTLFLYGVVFLFGSIGNFLVIFTI-TWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQYLL-DH----ASVPCTLLTACFYVAMFASLCFITEIALDRYYAIVYMRYRPVKQA--------CLFSIFWWIFAVIIAIPHFMVVTKKD------NQCMTDYDYL-----EVSYPIILNVELMLGAFVIPLSVISYCYYRISRIVA-------VSQSRHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTL----KLLKWISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHCLLAE------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XT3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -261018 for 2032 contacts (-128.5/contact) +
2D Compatibility (PS) -27644 + (NN) -1229 + (LL) 3124
1D Compatibility (HY) -40000 + (ID) 4850
Total energy: -331617.0 ( -163.20 by residue)
QMean score : 0.172
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