Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANYTLAPEDEYDVLIEGELESDEAEQCDKYDAQALSAQLVPSLCSAVFVIGVLDNLLVVLILVKYKGLKRVENIYLLNLAVSNLCFLLTLP---------FWAHAGGDPMCKILIGLYFVGLYSETFFNCLLTVQRYLVFLHKGNFFSARRRVPCGIITSVLAWVTAILATLPEFVVYKPQMEDQKYKCAFSRTPFLPADETFWKHFLTLKMNISVLVLPLFIFTFLYVQMRKTLRF-------REQRYSLFKLVFAIMVVFLLM---WAPYNIAFFLSTFKEHFSLSDCKSSYNLDKSVHITKLIATTHCCINPLLYAFLDGTFSKYLCRCFHLRSNTPLQPRGQSAQGTSREEPDHSTEV |
| 4EA3 Chain:A ((134-400)) | ----------------------------------------------AVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVLLTLPFQGTDILLGFWPF--GNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHP-------TSSKAQAV-NVAIWALASVVGVPVAIMGSAQVEDEEIECLVE----IPTPQDYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLSGSREKDRNLRRITRLVLVVVAVFVGCWTPVQV-FVLAQ-----GLGVQPSSETAVAILRFCTALGYVNSCLNPILYAFLDENFKACFR-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -221090 for 1776 contacts (-124.5/contact) +
2D Compatibility (PS) -24237 + (NN) -6379 + (LL) 5456
1D Compatibility (HY) -28000 + (ID) 3450
Total energy: -277700.0 ( -156.36 by residue)
QMean score : 0.330
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