Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDETGNLTVSSATCHDTIDDFRNQVYSTLYSMISVVGFFGNGFVLYVLIKTYHKKSAFQVYMINLAVADLLCVCTLPLRVVYYV-HKGIWLFGDFLCRLSTYALYVNLYCSIFFMTAMSFFRCIAIVFPVQNINLVTQKKARFVCVGIWIFVILTSSPFLMAKPQKDEKNNTKCFEPPQDNQTKNHVLVLHYVSLFVGFIIPFVIIIVCYTMIILTLLKKSMKKNLSSHK-KAIGMIMVVTAAFLVSFMPYHIQRTIH-LHFLHNETKPCDSVLRMQKSVVITLSLAASNCCFDPLLYFFSGGNFRKR----LSTFRKHSLSSVTYVPRKKASLPEKGEEICKV |
| 4XT1 Chain:A ((47-318)) | ----------------------------LYGVVFLFGSIGNFLVIFTITWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQYLLD--------SVPCTLLTACFYVAMFASLCFITEIALDRYYAIVY----MRYRPVKQACLFSIFWWIFAVIIAIPHFMVVTKKDNQCMTD-----YDYLEVSYPIILNVELMLGAFVIPLSVISYCYYRI-----SRIVAVSQSRHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHCLLAEFR--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -229114 for 1894 contacts (-121.0/contact) +
2D Compatibility (PS) -26361 + (NN) -2934 + (LL) 4312
1D Compatibility (HY) -33600 + (ID) 4100
Total energy: -291797.0 ( -154.06 by residue)
QMean score : 0.250
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