Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METNSSLPTNISGGTPAVSAGYLFLDIITYLVFAVTFVLGVLGNGLVIW-VAGFRMTHTVTTISYLNLAVADFCFTSTLPFFMVRKAMGGHWPFGWFLCKFVFTIVDINLFGSVFLIALIALDRCVCVLHPVWTQNHRTVSLAKKVIIGPWVMALLLTLPVIIRVTTVPGKTGTVACTFNF-SP-WTNDPKERINVAVAMLTVRGIIRFIIGFSAPMSIVAVSYG----LIATKIHKQGLIKSSRPLRVLSFV----AAAFFLCWSPYQVVALIAT---VRIRELLQGMYKEIGIAVDVTSALAFFNSCLNPMLYVFMGQDFRERLIHALPASLERALTEDSTQTSDTATNSTLPSAEVELQAK |
| 4RWD Chain:A ((113-400)) | ----------------ARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMET-WPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRP-RDGAVVCMLQFPSPSWYWD------------TVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRDPL------VVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLC---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -234390 for 2041 contacts (-114.8/contact) +
2D Compatibility (PS) -27823 + (NN) -4477 + (LL) 3716
1D Compatibility (HY) -24400 + (ID) 4950
Total energy: -292324.0 ( -143.23 by residue)
QMean score : 0.212
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