Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDVTSQARGVGLEMYPGTAQPAAPNTTSPELNLSHPLLGTALANGTGELSEHQQYVIGLFLSCLYTIFLFPIGFVGNILILVVNISFREKMTIPDLYFINLAVADLILVADSLIEVFNLHERYYDIA-VLCTFMSLFLQVNMYSSVFFLTWMSFDRYIALARAMRCSLFRTKHHARLSCGLIW-MASVSATLVPFTAVHLQHTDEACFCFADVREVQ--WLEV------TLGFIVPFAIIGLCYSLIVRVLVRAHRHRGLRPRR---QKALRMILAVVLVFFVCWLPENVFISVHLLQRTQPGAAPCKQSFRHAHPLTGHIVNLAAFSNSCLNPLIYSFLGETFRDKLRLYIEQKTNLPALNRFCHAALKAVIPDSTEQSDVRFSSAV |
| 4EA3 Chain:A ((128-405)) | -------------------------------------------------------IVGLYLAVCVG------GLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVLLTLPFQGTDILLGFWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHP-------TSSKAQAVNVAIWALASVVGVPVAIMG-SAQVEDEEIECLVEIPTPQDYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLSGSREKDRNLRRITRLVLVVVAVFVGCWTPVQVFVLAQGLG-VQPSSETAVAILRFCTAL--------GYVNSCLNPILYAFLDENFKACFR--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -247756 for 1913 contacts (-129.5/contact) +
2D Compatibility (PS) -26141 + (NN) -7422 + (LL) 7660
1D Compatibility (HY) -26000 + (ID) 4250
Total energy: -303909.0 ( -158.87 by residue)
QMean score : 0.316
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