Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MCFSPILEINMQSESNITVRDDIDDINTNMYQPLSYPLSFQVSLTGFLMLEIVLGLGSNLTVLVLYCMKSNLINSVSNIITMNLHVLDVIICVGCIPLTIVILLLSLESNTALICCFHEAC-VSFASVSTAINVFAITLDRYDISVKP--ANRILTMGRAVMLMISIWIFSFFSFLIPFIEVNFFSLQSGNTWENKT------LLCVSTNEYYTELGMYYHLLVQIPIFFFTVVVMLITYTKILQALNIRIGTRFSTGQKKKARKKKTISLTTQHEATDMSQSSGGRNVVFGVRTSVSVIIALRRAVKRHRERRERQKRVFRMSLLIISTFLLCWTPISVLNT-TILCLGPSDLLVKLRLCFLVMAYGTTIFHPLLYAFT----RQKFQKVLKSKMKKRVVSIVEADPLPNNAVIHNSWIDPKRNKKITFEDSEIREKCLVPQVVTD |
| 3RFM Chain:A ((18-305)) | ----------------------------------------------------VLAILGNVLVCWAVWLNSNLQN-VTNYFVVSLAAADILVGVLAIPFAITI---STGFCAACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTPMLGWN----NCGQP-----GCGEGQVACLFEDVVPMNYMVYFNFFACVLV---PLLLMLGVYLRIFAA----------------ARRQ-----LKQME----SQPLPG---------------------ERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS----------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RFM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -195395 for 2021 contacts (-96.7/contact) +
2D Compatibility (PS) -27114 + (NN) -3780 + (LL) 12976
1D Compatibility (HY) -24800 + (ID) 3900
Total energy: -242013.0 ( -119.75 by residue)
QMean score : 0.219
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