Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANASEPGGSGGGEAAALGLKLATLSLLLCVSLAGNVLFALLIVRERSLHRAPYYLLLDLCLADGLRALACLPAVMLAARRAAAAAGAPPGALGCKLLAFLAALFCFHAAFLLLGVGVTRYLAIAHHRFYAERLAGWPCAAMLVCAAWALAL-----AAAFPPVLDGGGDDEDAPCALEQRPDGAPGALGFLLLLAVVVGATHL-VYLRLLFFIHDRR----KMRPARLVPAVSHDWTFHGPGATGQAAANWTAGFGRGPTPPALVGIRPAGPGRGARRLLVLEEFKTEKRLCKMFYAVTLLFLLLWGPYVVASYLRVLVRPGAVPQAYLTASVWLTFAQAGINPVVCFLFNRELRDCFRAQFPCCQSPRTTQATHPCDLKGIGL |
| 4MQS Chain:A ((36-333)) | ----------KTFEVVFIVLVAGSLSL---VTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYT----VIGYWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTT-KMAGMMIAAAWVLSFILWAPAILFWQFIVGVRTVEDGECYIQFFSNAA-------VTFGTAIAAFYLPVIIMTVLYWHISRASKS---------------------------------------PP---------PSR-------------EKKVTRTILAILLAFIITWAPYNVMVLINTFCAP-CIPNTVWTIGYWLCYINSTINPACYALCNATFKKTFKHLLM--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MQS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -228972 for 1949 contacts (-117.5/contact) +
2D Compatibility (PS) -29141 + (NN) -32519 + (LL) 4928
1D Compatibility (HY) -26000 + (ID) 3500
Total energy: -315204.0 ( -161.73 by residue)
QMean score : 0.342
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