Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNRHHLQDHFLEIDKKNCCVFRDDFIVKVLPPVLGLEFIFGLLGNGLALWIFCFHLKSWKSSRIFLFNLAVADFLLIICLPFLMDNYVRRWDWKFGDIPCRLMLFMLAMNRQGSIIFLTVVAVDRYFRVVHPHHALNKISNRTAAIISCLLWGIT--IGLTVHLLKKKMPIQNGGANLCS----------SFSICHTFQWHEAMFLLEFFLPLGIILFCSARIIWSLR-------QRQMDRHAKIKRAITFIMVVAIVFVICFLPSVVVRIRIFWLLHTSGTQNCEVYRSVDLAFFITLSFTYMNSMLDPVVYYFSSPSFPNFFSTLINRCLQRKMTGEPDNNRSTSVELTGDPNKTRGAPEALMANSGEPWSPSYLGPTSP |
4EA3 Chain:A ((137-404)) | --------------------------------------VGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVLLTLPFQGTDILLGF-WPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHP-------TSSKAQAVNVAIWALASVVGVPVAIMGSAQVEDEEIECLVEIPTPQDYWGPVFAIC--------IFLFSFIVPVLVISVCYSLMIRRLRGVRLLSGSREKDRN--LRRITRLVLVVVAVFVGCWTP-----VQVFVLAQGLGVQPSSETAVAILRFCTALG--YVNSCLNPILYAFLDENFKACFR--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -241604 for 1812 contacts (-133.3/contact) +
2D Compatibility (PS) -24515 + (NN) -6779 + (LL) 6552
1D Compatibility (HY) -26800 + (ID) 3850
Total energy: -296996.0 ( -163.91 by residue)
QMean score : 0.200
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