Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLANSSSTNSSVLPCPDYRPTHRLHLVVYSLVLAAGLPLNALALWVFLRALRVHSVVSVYMCNLAASDLLFTLSLPVRLSYYALHHWPFPDLLCQTTGAIFQMNMYGSCIFLMLINVDRYAAIVHPLRLRHLRRPRVARLLCLGVWALILVFAVPAARV--HRPSRC--RYRDLEVRLCFESFSDELWKGRLLPLVLLAEAL--GFLLPLAAVVYSSGRVFWTLARPDATQSQRRRKTVRLLLANLVIFLLCFVPYNSTLAVYGLLRSKLVAASVPARDRVRGVLMVMVLLAGANCVLDPLVYYFSAEGFRNTLRGLGTPHRARTSATNGTRAALAQSERSAVTTDATRPDAASQGLLRPSDSHSLSSFTQCPQDSAL |
| 4XT1 Chain:A ((45-318)) | -------------------------LFLYGVVFLFGSIGNFLVIFTITWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQY-LLD-----SVPCTLLTACFYVAMFASLCFITEIALDRYYAIVY-MRYRPVKQ---ACLFSIFWWIFAVIIAIPHFMVVTKKDNQCMTDYDYLEVSY---------------PIILNVELMLGAFVIPLSVISYCYYRISRIVA---VSQSRHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHCLLAEFR-------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -251563 for 1909 contacts (-131.8/contact) +
2D Compatibility (PS) -27078 + (NN) -10104 + (LL) 4692
1D Compatibility (HY) -34800 + (ID) 4250
Total energy: -323103.0 ( -169.25 by residue)
QMean score : 0.309
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