Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAPSHRASQVGFCPTPERPLWRLPPTCRPRRMSVCYRPPGNETLLSWKTSRATGTAFLLLAALLGLPGNGFVVWSLAGWRPARGRPLAATLVLHLALADGAVLLLTPLFVAFLTRQAWPLGQAGCKAVYYVCALSMYASVLLTGLLSLQRCLAVTRPFLAPRLRSPALARRLLLAVWLAALLLAVPAAVYRHLWRDR----VCQLCHPSPV---HAAAHLSLETLTAFVLPFGLMLGCYSVTLARLRGARWGSG-----RHGARVGRLVSAIVLAFGLLWAPYHAVNLLQAVAALAPPEGALAKLGGAGQAARAGTTALAFFSSSVNPVLYVFTAGDLLPRAGPRFLTRLFEGSGEARGGGRSREGTMELRTTPQLKVVGQGRGNGDPGGGMEKDGPEWDL |
| 4RWD Chain:A ((135-393)) | ---------------------------------------------------------------VGLLGNVLVMFGIV--RYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVM-AVTRPRDGAVVCMLQFPSPSWYWDTVTKICV-FLFAFVVPILIITVCYGLMLLRLRSVRLLSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRDPLVV-------AALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLC------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212901 for 1821 contacts (-116.9/contact) +
2D Compatibility (PS) -26098 + (NN) -17067 + (LL) 4848
1D Compatibility (HY) -24400 + (ID) 4100
Total energy: -279718.0 ( -153.61 by residue)
QMean score : 0.334
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