Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSSFHLHFLDLNLNATEGNLSGPNVKNKSSPCEDMGIAVEVFLTLGVISLLENILVIGAIVKNKNLHSPMYFFVCSLAVADMLVSMSSAWETITIYLLNNKHLVIADAFVRHIDNVFDS----------MICISVVASMCSLLAIAVDRYVTIFYALRYHHIMTARRSGAIIAGIW------------------------AFCTGC--GIVFILYSESTYVILCLISMFFA----MLFLLVSLYIHMFLLARTHVKRIAALPGASSARQRTSMQ----GAVTVTMLLGVFTVCWAPFFLHLTLMLSCPQNLYCSRFMSHFNMYLILIM--CNSVMDPLIYAFRSQEMRKTFKEIICCRGFRIACSFPRRD |
| 4UHR Chain:A ((6-303)) | -----------------------------------SSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVG------------------VLAIPFAIAISTGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKA---GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQP-LPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDC-HAPLWL----MYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQQEPFKAAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -288800 for 1802 contacts (-160.3/contact) +
2D Compatibility (PS) -25675 + (NN) -10285 + (LL) 2772
1D Compatibility (HY) -32400 + (ID) 4500
Total energy: -358888.0 ( -199.16 by residue)
QMean score : 0.449
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