Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNPFHASCWNTSAELLNKSWNKEFAYQTASVVDTVILPSMIGIICSTGLVGNILIVFTIIR-SRKKTVPDIYICNLAVADLVHIVGMPFLIHQWARGGEWVFGGPLCTIITSLDTCNQFACSAIMTVMSVDRYFALVQPFRLTRWRTRYKTIRINLGLWAASFILALPVWVYSKVIKFKDGVESCAFDLTSPDDVLWY-----TLYLTITTFFFPLPLILVCYILILCYTWEMYQQNKDARCCNPSVPKQR-VMKLTKMVLVLVVVFILSAAPYHVIQLVNLQMEQPTLAFY-VGYYLSICLSYASSSINPFLYILLSGNFQKRLPQIQRRATEKEINNMGNTLKSHF |
| 5C1M Chain:A ((11-294)) | ---------------------------SPSMVTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATSTLPFQSVNYLMG-TWPFGNILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPV-MFMATTKYRQGSIDCTLTFSHPT---WYWENLLKICVFIFAFIMPVLIITVCYGL-------MILRLKSVRMLSGSKEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALITIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCF----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5C1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -235628 for 2028 contacts (-116.2/contact) +
2D Compatibility (PS) -27769 + (NN) -2084 + (LL) 4352
1D Compatibility (HY) -31600 + (ID) 4750
Total energy: -297479.0 ( -146.69 by residue)
QMean score : 0.258
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