Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MWQKNQTSLADFILEGLFDDSLTHLFLFSLTMVVFLIAVSGNTLTILLICIDPQLHT-PMYFLLSQLSLMDLMHVSTIILKMATNYL-SGKKSISFVGCATQHFLYLCLGGAECFLLAVMSYDRYVAICHPLRY-AVLMNKKVGLMMAVMSWLGASVNSLIHMAILMHFPFCGPRKVYHFYCEFPAVVKLVCGDITVYETTVYISSILLLLPIFLISTSYVFILQSVIQMRSSGSKRNAFATCGSHLTVVSLWFGACIFSYMRPRSQCTLLQNKVGSVFYSIITPTLNSLIYTLRNKDVAKALRRVLRRDVITQCIQRLQLWLPRV |
4U16 Chain:A ((13-160)) | ------------------------VFIAFLTGFLALVTIIGNILVIVAFKVNKQLKTVNNYFLLS-LACADLI-IGVISMNLFTTYIIMNRWALGNLACDLWLSIDYVASNASVMNLLVISFDRYFSITRPLTYRAKRTTKRAGVMIG-LAWVISFV--LWAPAILFWQYFVGKRTVPPGECFIQFLSEPTITFGTAIAAFYMPVTIMTILYWRIYKETEKMNIFEMLRIDEGGGSGGDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U16.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118870 for 903 contacts (-131.6/contact) +
2D Compatibility (PS) -14770 + (NN) -7523 + (LL) 1948
1D Compatibility (HY) -16400 + (ID) 2400
Total energy: -158015.0 ( -174.99 by residue)
QMean score : 0.154
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