Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNNVIEFILLGLTHNPELQKFLFVMFLITYL--ITLAGNLFISVIIFISPALGSPMYSFPSYLFIIDIFCSSSIAPKMNFDLISEKNTISFNGCMTQLFTEHFFYYYYYYTLTEIILLSVMAYDHYVAIRKPLHYATIMSQPMCGFLMVVAGILGFVHGGIQTLFIAQLPFCGPNVINHFMCDLVPLLELACTDTHTLGPLIAANSGSLCFLIFSMLVASYVIILCFLRTHSSEGRRKALSSCASHIFIVILFFVPFSYLYLRPTSFPTDKAVTVFCTLFTPMLNPLIYTLKNKEVKNVIKKLWKQIMTTDDK |
4U16 Chain:A ((9-183)) | -----------------IWQVVFIAFLTGFLALVTIIGNILVIVAFKVNKQLKTV-----NNYFLLSLACADLIIGVISMNLFTTY-IIMNRWALGNLACDLWLSIDYVASNASVMNLLVISFDRYFSITRPLTYRAKRTTKRAGVMIGLAWVISFVLWAPAILFWQY--FVGKRTVPPGEC----FIQFLSEPTITFGTAIAAFYMPVTIMTILYWRIYKETEKMNIFEMLRIDEGGGSGGDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U16.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115904 for 1110 contacts (-104.4/contact) +
2D Compatibility (PS) -17164 + (NN) 639 + (LL) 1592
1D Compatibility (HY) -17200 + (ID) 1950
Total energy: -149987.0 ( -135.12 by residue)
QMean score : 0.087
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