Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSHTNVTIFHPAVFVLPGIPGLEAYHIWLSIPLCLIYITAVLGNSILIVVIVMERNLHVPMYFFLSMLAVMDILLSTTTVPKALA----------IFWLQAHNIAFDACVTQGFFVHMMFVGESAILLAMAFDRFVAICAPLRYTTVLTWPVVGRIALAV-ITRSFCIIFPVIFLLKRLPFCLTNIVPHSYCEHIG-VARLACADITVNIWYGFSVPIVMVILDVILIAVSYSLILRAVFR-LPSQD----ARHKALSTCGSHLCVILMFYVPSFFTLLTHHFGRN-IPQHVHILLANLYVAVPPMLNPIVYGVKTKQIREGVAHRFFDIKTWCCTSPLGS |
| 4LDL Chain:A ((179-447)) | ----------------------EVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWTSIDVLCVTASI----------ETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYR----------ATHQEAINCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQ---KFALKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILL-NWIGYVNSGFNPLIYCRSPDFRIAFQELLCL------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LDL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -283704 for 1813 contacts (-156.5/contact) +
2D Compatibility (PS) -24766 + (NN) -2421 + (LL) 4008
1D Compatibility (HY) -22000 + (ID) 3550
Total energy: -332433.0 ( -183.36 by residue)
QMean score : 0.306
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