Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGDNSSSLTPGFFILNGVPGLEATHIWI---SLPFCFMYIIAVVGNCGLICLISHEEALHRPMYYFLALLSFTDVTLCTTMVP--------------NMLCIFWFNLKEIDFNACLAQMFFVHMLTGMESGVLMLMALDRYVAICYPLRYATILTNPVIAKAGLATFLRNVMLIIPFTLLTKRLPYCRGNFIPHTYCDHMS-VAKVSCGNFKVNAIYGLMVALLIGVFDICCISVSYTMILQ-AVMSLSSAD----ARHKAFSTCTSHMCSIVITYVAAFFTFFTHRFVGHNIPNHIHIIVANLYLLLPPTMNPIVYGVKTKQIQEGVIKFLLGDKVSFTYDK |
| 4QKX Chain:A ((177-447)) | -----------------------ADEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAACILTKTWTFGNFWCEFWTSIDVLCVTASIE--------------TLCVIAVDRYFAITSPFKYQSLLTKN---KARVI-----ILMVWIVSGLTSFLP-IQMHWYRATHQEAINCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQ---KFALKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILL-NWIGYVNSGFNPLIYCRSPDFRIAFQELLCL---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QKX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -243806 for 1755 contacts (-138.9/contact) +
2D Compatibility (PS) -24772 + (NN) -5216 + (LL) 3212
1D Compatibility (HY) -28000 + (ID) 3000
Total energy: -301582.0 ( -171.84 by residue)
QMean score : 0.180
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