Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIQPMASPSNSSTVPVSEFLLICFPNFQSWQHWLSLPLSLLFLLAMGANTTLLITIQLEASLHQPLYYLLSLLSLLDIVLCLTVIPKVLAIFWYDLRSISFPACFL-QMFIMNSFLPMESC--TFMVMAYDRYVAICHPLRYPSIITNQFVAKASVFIVVRNALLTAPIPILTSLLHYCGENVIENCICANLSVSRLSCDNFTLNRIYQFVAG-WTLLGSDLFLIFLSYTFILRAVLRFKAEGAAV-----------KALSTCGSHFILILFFSTILLVVVLTNVA----RKKVPMDILILLNVLHHLIPPALNPIVYGVRTKEIKQGIQKLLQRGR |
| 2YCZ Chain:A ((9-297)) | ----------------------------QWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLV---VRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTR---ARAKVIICTVWA-ISALVSFLPIMMHWWRDEDPQALKCYQDP----GCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKRVMLMREHKALKTLG---IIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGY-ANSAMNPIIY-CRSPDFRKAFKRLLAF-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -229828 for 1945 contacts (-118.2/contact) +
2D Compatibility (PS) -27649 + (NN) -11310 + (LL) 3296
1D Compatibility (HY) -30400 + (ID) 3700
Total energy: -299591.0 ( -154.03 by residue)
QMean score : 0.250
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