Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGNITADNSSMSCTIDHTIHQTLAPV---VYVTVLVVGFPANCLSLYFGYLQIKARNELGVYLCNLTVADLFYICSLPFWLQYVLQHDNWSHGDLSCQVCGILLYENIYISVGFLCCISVDRYLAVAHPFRFHQFRTLKAAVGVSVVIWAKELLTSIYFLMHEEVIEDENQHRVCFEH----YPIQAWQRAINYYRFLVGFLFPICLLLASYQGILRAVRRSHGTQKSRKDQIQRLVLSTVVIFLACFLPYHVLLLVRSV----W-EASCDFAKGVFNAYHFSLLLTSFNCVADPVLYCFVSETTHRDLARLRGACLAFLTCSRTGRAREAYPLGAPEASGKSGAQGEEPELLTKLHPAFQTPNSPGSGGFPTGRLA |
4XT1 Chain:A ((25-310)) | ------DEDATPCVFTDVLNQS-KPVTLFLYGVVFLFGSIGNFLVIFTITWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQYLLD-------SVPCTLLTACFYVAMFASLCFITEIALDRYYAIV----YMRYRPVKQACLFSIFWWIFAVIIAIPHFM--VVTKKDNQCMTDYDYLEVSYPI-----ILNVELMLGAFVIPLSVISYCYYRISRIVAVSQSRHKGR---IVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHCLLAEFR------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -232679 for 1948 contacts (-119.4/contact) +
2D Compatibility (PS) -26954 + (NN) -1826 + (LL) 3652
1D Compatibility (HY) -35600 + (ID) 4000
Total energy: -297407.0 ( -152.67 by residue)
QMean score : 0.213
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