Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKANETSPVMGFVLLRLSAHPELEKTFFVLILLMYLVILLGNGVLILVTILDSRLHTPMYFFLGNLSFLDICFTTSSVPLVLDSFLTPQETISFSACAVQMALSFAMAGTECLLLSMMAFDRYVAICNPLRYSVIMSKAAYMPMAASSWAIGGAASVVHTSLAIQLPF---CGDNVINHFTCEILAVLKLACADISINVISMEVTNVIFLGVPVLFISFSYVFI---------ITTILRIPSAEG-RKKVFSTCSAHLTVVIVFYGTLFFMYGKPKSKDSMGADKEDLSDKLIPLFYGVVTPMLNPIIYSLRNKDVKAAVRRLLRPKGFTQ |
| 3NYA Chain:A ((46-317)) | -----------------------------IVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWTSIDVLCVTASIWTLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSF----LPIQMHWYRATHQEAINCYAEE-------TCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNIFEMLRID--EGLRLKIYKDTEGYYTI-----GIGHLLTKSP----SLNAAKSELDKAIGRNTNGVITKDEAEKLF---NQDVDAAVRGILRNAKLKP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NYA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160865 for 1709 contacts (-94.1/contact) +
2D Compatibility (PS) -26546 + (NN) -3750 + (LL) 4984
1D Compatibility (HY) -19600 + (ID) 3500
Total energy: -209277.0 ( -122.46 by residue)
QMean score : 0.193
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