Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MENKTEVTQFILLGLTNDSELQVPLFITFPFIYIITLVGNLGIIVLIFWDSCLHNPMYFFLSNLSLVDFCYSSAVTPIVMAGFLIEDKVISYNACAA-QMYIFVA-----FATVENYLLASMAYDRYAAVCKPLHYTTTMTTTVCARLAIGSYLCGFLNASIHTGDTFSLSFC---KSNEVHHFFCDIPAVMVLSCSDRHISELV-LIYVVSFNIF----IALLVILISYTFIFITILKM------------HSASVYQKPLSTCASHFIAVGIFYGTII-------FMYLQPSSSHSMDTDKMAPVFYTMVIPMLNPLVYSLRNKEVKSAFKKVVEKAKLSVGWSV |
3UZA Chain:A ((16-304)) | -------------------------------IAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAIPFAI--------TISTGFCAACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGT---RAAGIIAICWVLSFAIGLTPMLGWNNCGQP--------GCGEGQVACL------FEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UZA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -235214 for 1824 contacts (-129.0/contact) +
2D Compatibility (PS) -24612 + (NN) -1364 + (LL) 4592
1D Compatibility (HY) -21600 + (ID) 3400
Total energy: -281598.0 ( -154.38 by residue)
QMean score : 0.257
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