Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENNTEVSEFILLGLTNAPELQVPLFIMFTLIYLITLTGNLGMIILILLDSHLHTPMYFFLSNLSLAGIGYSSAVTPKVLTGLLIEDKAISYS-----ACAAQMF---FCAVFATVENYLLSSMAYDRYAAVCNPLHYTTTMT-TRVCACLAIGCYVIGFLNASIQIGDTFRLSFCMSNVIHHFFCDKPAVITLTCSEKHISELILVLISS-----FNVFFALLVTLISYLFILITIL---KRHTGKGYQKPLS-------------TCGSHLIAIFLFYITVIIMYI-------RPSSSHSMDTDKIASVFYTMIIPMLSPIVYTLRNKDVKNAFMKVVEKAKYSLDSVF |
| 3PWH Chain:A ((16-304)) | -------------------------------IAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADI----------LVGVLAIPFAITISTGFCAACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAI-CWVLSF-----AIGLTPMLGW--NN------CGQP-----GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PWH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -235112 for 1776 contacts (-132.4/contact) +
2D Compatibility (PS) -24494 + (NN) -3403 + (LL) 5768
1D Compatibility (HY) -26000 + (ID) 3650
Total energy: -286891.0 ( -161.54 by residue)
QMean score : 0.287
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