Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEGISNFKTPSKLSEKKKSVLCSTPTINIPASPFMQKLGFGTGVNVYLMKRSPRGLSHSPWAVKKINPICNDHYRSVYQKRLMDEAKILKSLHHPNIVGYRAFTEANDGSLCLAMEYGGEKSLNDLIEERYKASQDPFP---AAIILKVALNMARGLKYLH--QEKKLLHGDIKSSNVVIKGDFETIKICDVGVSLPLDENMTVTDPEACYIGTEPWKPKEAVEENGVITDKADIFAFGLTLWEMMTLSIPHINLSNDDDDEDKTFDESDFDDEAYYAAL--GTRPPINMEELDESYQKVIE-LFSVCTNEDPKDRPSAAHIVEALETDV |
| 4L52 Chain:A ((46-259)) | ------------------------------------------------------------------------------RKAFIVELRQLSRVNHPNIV---KLYGACLNPVCLVMEYAEGGSLYNVLH-----GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGT------------GSAAWMAPE-------VFEGSNYSEKCDVFSWGIILWEVIT--------------RRKPFDEIGGPAFRIMWAVHNGTRPP-----LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L52.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81101 for 1445 contacts (-56.1/contact) +
2D Compatibility (PS) -21720 + (NN) -21569 + (LL) 5636
1D Compatibility (HY) -19200 + (ID) 3600
Total energy: -141554.0 ( -97.96 by residue)
QMean score : 0.410
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