Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGGPGPGEPAAPGAQHFLYEVPPWVMCRFYKVMDALEPADWCQFAALIVRDQTELRLCERSGQRTASVLWPWINRNARVADLVHILTHLQLLRARDIITAWHPPAPLPSPGTTAPRPSSIPAPAEAEAWSPRKLPSSASTFLSPAFPGSQTHSGPELGLVPSPASLWPPPPSPAPSSTKPGPESSVSLLQGARPFPFCWPLCEISRGTHNFSEE------LKIGEGGFGCVYRAVMRNTVYAVKRLKENADLEWTAVKQSFLTEVEQLSRFRHPNIVDFAGYCAQNGFYCLVYGFLPNGSLEDRLHCQTQACPPLSWPQRLDILLGTARAIQFLHQDSPSLIHGDIKSSNVLLDERLTPKLGDFGLARFSRFAGSSPSQSSMVARTQTVRGTLAYLPEEYIKTGRLAVDTDTFSFGVVVLETLAGQRAVKTHGARTKYLKDLVEEEAEEAGVALRSTQSTLQAGLAADAWAAPIAMQIYKKHLDPRPGPCPPELGLGLGQLACCCLHRRAKRRPPMTQVYERLEKLQAVVAGVPGHSEAASCIPPSPQENSYVSSTGRAHSGAAPWQPLAAPSGASAQAAEQLQRGPNQPVESDESLGGLSAALRSWHLTPSCPLDPAPLREAGCPQGDTAGESSWGSGPGSRPTAVEGLALGSSASSSSEPPQIIINPARQKMVQKLALYEDGALDSLQLLSSSSLPGLGLEQDRQGPEESDEFQS |
| 4U9A Chain:A ((20-310)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAA--------LKQQFDQEIKVMAKCQHENLVELLGFS-----LCLVYVYMPNGSLLDRLSC-LDGTPPLSWHMRCKIAQGAANGINFLHENHH--IHRNIKSANILLDEAFTAKISDFGLA------------TVMTSR---IVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEH----------------------REPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVE-----AMYSVASQCLHEKKNKRPDIKKVQQLLQEMT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U9A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159314 for 2128 contacts (-74.9/contact) +
2D Compatibility (PS) -27121 + (NN) -3893 + (LL) 18852
1D Compatibility (HY) -22800 + (ID) 5350
Total energy: -199626.0 ( -93.81 by residue)
QMean score : 0.354
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