Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNGEAICSALPTIPYHKLADLRYLSRGASGTVSSARHADWRVQ-VAVKHLHIHTPLLDSERKDVLREAEILHKARFSYILPILGICNEPEFLGIVTEYMPNGSLNELLHRKTEYPDVAWPLRFRILHEIALGVNYLHNMTPPLLHHDLKTQNILLDNEFHVKIADFGLSKWRMMSLSQSRSSKSAPEGGTIIYMPPE-----NYEPGQKSRASIKHDIYSYAVITWEVLSRKQPFEDVTNPLQIMYSVSQGHRPVINE--ESLPYDIPHRARMISLIESGWAQNPDERPSFLKCLIELEPVLRTFEEITFLEAVIQLKKTKLQSVSSAIHLCDKKKMELSLNIPVNHGPQEESCGSSQLHENSGSPETSRSLPAPQDNDFLSRKAQDCYFMKLHHCPGNHSWDSTISGSQRAAFCDHKTTPCSSAIINPLSTAGNSERLQPGIAQQWIQSKREDIVNQMTEACLNQSLDALLSRDLIMKEDYELVSTKPTRTSKVRQLLDTTDIQGEEFAKVIVQKLKDNKQMGLQPYPEILVVSRSPSLNLLQNKSM |
| 4ITI Chain:A ((23-278)) | -----------------------LDSGGFGKVSLAFH---RTQGLMIMKTVYKGPNCIEHNEALLEEAKMMNRLRHSRVVKLLGVIIEEGKYSLVMEYMEKGNLMHVLKAEMSTP---LSVKGRIILEIIEGMAYLHG--KGVIHKDLKPENILVDNDFHIKIADLGLASFKMWSKLNNEEHNEL--GGTLYYMAPEHLNDVNAKPTEKS------DVYSFAVVLWAIFANKEPYE-----QQLIMAIKSGNRPDVDDITEYCPREI------ISLMKLCWEANPEARPTFPGIEEKFRPFYLSQLE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ITI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101441 for 1739 contacts (-58.3/contact) +
2D Compatibility (PS) -25076 + (NN) -13171 + (LL) 18584
1D Compatibility (HY) -22800 + (ID) 4450
Total energy: -148354.0 ( -85.31 by residue)
QMean score : 0.406
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