Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------AVSCGQVSSA--LSPCISYARGNG-----------------ASPSAACCSGVRSLASSARSTADKQAVCKCIK------SAAAGLNAGKAAGIPTKCGVSVPYA---ISSSVDCSKIH |
1W2Q Chain:A ((1-127)) | GPMRRERGRQGDSSSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAPQRCDLDVSGGRCS--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W2Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15676 for 554 contacts (-28.3/contact) +
2D Compatibility (PS) -8471 + (NN) 3712 + (LL) 312
1D Compatibility (HY) 0 + (ID) 650
Total energy: -20773.0 ( -37.50 by residue)
QMean score : 0.259
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