Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------AVSCGQVSSA--LSPCISYARGNG-----------------ASPSVACCSGVRSLASSARSTADKQAACKCIK------SAAAGLNAGKAAGIPTKCGVSVPYA---ISSSVDCSKIR |
| 1W2Q Chain:A ((1-127)) | GPMRRERGRQGDSSSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAPQRCDLDVSGGRCS--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1W2Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -13865 for 554 contacts (-25.0/contact) +
2D Compatibility (PS) -8471 + (NN) 3914 + (LL) 368
1D Compatibility (HY) 0 + (ID) 650
Total energy: -18704.0 ( -33.76 by residue)
QMean score : 0.203
|
|
|