Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------AISCGQVNTA--LASCVSYAKGSG-----------------ASPPGACCSGVRRLAG------LARSTADKQAACRCIKSAAGGLNPGKAASIPSKCGVSIPYS---ISASVDCSKIH |
1W2Q Chain:A ((1-127)) | GPMRRERGRQGDSSSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAPQRCDLDVSGGRCS--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1W2Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -17297 for 536 contacts (-32.3/contact) +
2D Compatibility (PS) -8403 + (NN) 4393 + (LL) 312
1D Compatibility (HY) 0 + (ID) 700
Total energy: -21695.0 ( -40.48 by residue)
QMean score : 0.171
|
|
|