Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATCSPTQLTPCAPAIIGNAAPSAACCGKLKAHPASCLCKYKKDPNLQRYVNSPSGKKVFTACKLRLPSC
2H1Z Chain:A ((1-39))
GSCVPVD-QPCSL-------NTQPCCDD-----ATCTQERNENGHTVYYCRA-----------------
General information:
TITO was launched using:
RESULT:
Template:
2H1Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6568 for 218 contacts (-30.1/contact) +
2D Compatibility (PS) -4380 + (NN) -2498 + (LL) 1820
1D Compatibility (HY) -1200 + (ID) 450
Total energy: -13276.0 ( -60.90 by residue)
QMean score : 0.175
(partial model without unconserved sides chains):
PDB file :
Tito_2H1Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H1Z-query.scw
PDB file :
Tito_Scwrl_2H1Z.pdb
: