Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EDTGDTGNVGVTCDARQLQPCLAAITGGGQPSGACCAKLTEQQSCLC----------GFAKNPAFAQYI---------SSPNARKVLLACNVAYPTC-----
2J9W Chain:A ((120-220))
HHMGNLNRCIADI-VSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSHLPPDFEGREKVSQWLQKLSSMSASDELDDSQVRQMLFDLESAYNAFNRFLH
General information:
TITO was launched using:
RESULT:
Template:
2J9W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26655 for 484 contacts (-55.1/contact) +
2D Compatibility (PS) -8051 + (NN) -2144 + (LL) -76
1D Compatibility (HY) -4000 + (ID) 500
Total energy: -41426.0 ( -85.59 by residue)
QMean score : 0.376
(partial model without unconserved sides chains):
PDB file :
Tito_2J9W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2J9W-query.scw
PDB file :
Tito_Scwrl_2J9W.pdb
: