Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VVVRVEEEEKVVCIVTDLRVCLPAVEAGSQPSVQCCGKLKE-----------QLSCLCGYLKIPSFTQYVSSGKAQKVLTACAIPIPKC
1BWO Chain:A ((7-78))
--------------DSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIH-NLNEDNARSIPPKCGVNLP--
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16880 for 369 contacts (-45.7/contact) +
2D Compatibility (PS) -5976 + (NN) -330 + (LL) 2232
1D Compatibility (HY) -2000 + (ID) 850
Total energy: -23804.0 ( -64.51 by residue)
QMean score : 0.180
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: