Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VTCSPMQLSPCATAITSSSPPSALCCAKLKE-----------QRPCLCGYMRNPSLRRFVSTPNARKVSKSCKLPIPRC
1BWO Chain:A ((8-78))
-----SLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIH-NLNEDNARSIPPKCGVNLP--
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7696 for 361 contacts (-21.3/contact) +
2D Compatibility (PS) -6137 + (NN) -3391 + (LL) 388
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -20786.0 ( -57.58 by residue)
QMean score : 0.229
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: