Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-QPPGGCVPQLNRLLACRAYLVP-------GAADPSADCCSALSSISRDCACSTMGIINSIPSRCNIGRVNCSA-----------------------------------------------
1HSS Chain:A ((5-124))
MCYPGQAFQV-PALPACRPLLRLQCNGSQVP-EAVLRDCCQQLAHISEWCRCGALYSMLDS--MYKEH------GAFPRCRREVVKLTAASITAVCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29294 for 351 contacts (-83.5/contact) +
2D Compatibility (PS) -5856 + (NN) -1993 + (LL) 536
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -40557.0 ( -115.55 by residue)
QMean score : 0.380
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: