Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--VCNMSNDEFMKCQPAAAATSNPTTNPSAGCCSALS-----HADLNCLCSYK---NSPWLSIYNIDPNRAMQLPAKCGL----TMPANC
1IGN Chain:A ((8-93))
KASFTDEEDEFI----LDVVRKNPTRRTTHTLYDEISHYVPNHTGNSIRHRFRVYLSKRLEYVYEVDKFGKLVRDDDGNLIKTKVLPPSI
General information:
TITO was launched using:
RESULT:
Template:
1IGN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21966 for 421 contacts (-52.2/contact) +
2D Compatibility (PS) -7710 + (NN) -4105 + (LL) 100
1D Compatibility (HY) -3200 + (ID) 600
Total energy: -37481.0 ( -89.03 by residue)
QMean score : 0.185
(partial model without unconserved sides chains):
PDB file :
Tito_1IGN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IGN-query.scw
PDB file :
Tito_Scwrl_1IGN.pdb
: