Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ERCNDSGIEVLRGCPDSIDKELPTPPRPSQGCCTLVRIIGMECVCEVINKEIEAAIDMQKLVNVAAACGRPLAPGSQCGSYLVPGGMIRH
1RKL Chain:A ((1-36))
----------------------------------------MISDEQLNSLAITFGIVMMTLIVIYHAVDSTMSPKN--------------
General information:
TITO was launched using:
RESULT:
Template:
1RKL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2497 for 140 contacts (-17.8/contact) +
2D Compatibility (PS) -3891 + (NN) -1197 + (LL) 1680
1D Compatibility (HY) -2400 + (ID) 350
Total energy: -8655.0 ( -61.82 by residue)
QMean score : 0.176
(partial model without unconserved sides chains):
PDB file :
Tito_1RKL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RKL-query.scw
PDB file :
Tito_Scwrl_1RKL.pdb
: