Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------HPCGRTFLSALIQLVPCRPSVAPFSTLPPNG-----------LCCAAIKTLGQPCLCVLAKG-------PPIVGVDRTLALHLPGKCSANFLPCN-
1S6D Chain:A ((1-103))
PYGRGRTESGCYQQMEEAE-MLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLMSQPCQM
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45785 for 499 contacts (-91.8/contact) +
2D Compatibility (PS) -7493 + (NN) -3287 + (LL) 204
1D Compatibility (HY) -2400 + (ID) 850
Total energy: -59611.0 ( -119.46 by residue)
QMean score : 0.225
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: