Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------------ADNDCAVA--QTAFGDCAGYVAGV---------------------ENKLSPRCCRALADIRDMAPTFVRQRALCACIHKEMVAAG------KVVTRRAAALPGRCGVRISFLPTTHNFDCSRIPRAD
1PSY Chain:A ((1-125))
AEFMESKGEREGSSSQQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQVRDE----CQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGVRCMRQTRTN-----------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45021 for 624 contacts (-72.1/contact) +
2D Compatibility (PS) -8712 + (NN) -1135 + (LL) 524
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -58394.0 ( -93.58 by residue)
QMean score : 0.383
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: