Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCGQ----VSSSLAQCIGYLQK--------GGAVPAACCSGLKG-------------LNSAATTTADRQGVCNCLKSLAGKISGINYGLAAGLPSK-CGVSISYKIS--PSTDCKSVK-----
1HSS Chain:A ((5-124))
--MCYPGQAFQVPALPACRPLLRLQCNGSQVP-EAVLRDCCQQLAHISEWCRCGALYSMLDS--MYKEH--------GAFPRCRREVVKLTAASITA-VCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32790 for 441 contacts (-74.4/contact) +
2D Compatibility (PS) -8135 + (NN) -1438 + (LL) 976
1D Compatibility (HY) -5200 + (ID) 950
Total energy: -47537.0 ( -107.79 by residue)
QMean score : 0.369
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: