Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----AVPCSTV-DMK-AAACVGFATGKDSKPSSACCTGLQQ--LAQTVKS---------------VDDKKAICRCLKASSKSLGIK-DQFLSKIPAACNIKVGFPVSTATNCETIH
2OP5 Chain:A ((5-115))
TDETAFLNSLFMDFTSENELELFLKSLDEVWSEDLYSRLSAAGLIRHVISKVWNKEQHRISMVFEYDSKEGYQKCQEIIDKEFGITLKEKLKKFVFKIHNNRGVVVSEFIR-----
General information:
TITO was launched using:
RESULT:
Template:
2OP5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12495 for 434 contacts (-28.8/contact) +
2D Compatibility (PS) -9438 + (NN) -1430 + (LL) 460
1D Compatibility (HY) -5200 + (ID) 1050
Total energy: -29153.0 ( -67.17 by residue)
QMean score : 0.313
(partial model without unconserved sides chains):
PDB file :
Tito_2OP5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OP5-query.scw
PDB file :
Tito_Scwrl_2OP5.pdb
: