Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQCSAAQLAACAPAIISGSPPTASCCSNLRA-----------QEPCFCQYARNPAYSSYINSPNARRTLTSCGIAVPSC
1BWO Chain:A ((7-78))
----DSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIH-NLNEDNARSIPPKCGVNLP--
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15207 for 369 contacts (-41.2/contact) +
2D Compatibility (PS) -6060 + (NN) 805 + (LL) 268
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -24144.0 ( -65.43 by residue)
QMean score : 0.290
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: