Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSCNTDLTDLVSKCQRFVIKTGPKFSPSPSCCAVVKNV--------DVACVCDLITKEIEDMID--MDKMVYVARSCGKKISAGTKCGNTQANAGGIVSGYIVPTA
1BWO Chain:A ((1-90))
-IDCGHVDSLVRPCLSYVQGGP---GPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCG--VNLPYTI-SLNIDCSRV---------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47612 for 524 contacts (-90.9/contact) +
2D Compatibility (PS) -8132 + (NN) -539 + (LL) 668
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -59215.0 ( -113.01 by residue)
QMean score : 0.421
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: