Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------AVSCGQVSSA--LSPCISYARGNG-----------------ASPSAACCSGVRSLVSSARSTADKQAACKCIK------SAAAGLNAGKAAGIPTKCGVSVPYA---ISSSVDCSKIR |
| 1W2Q Chain:A ((1-127)) | GPMRRERGRQGDSSSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAPQRCDLDVSGGRCS--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W2Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16857 for 554 contacts (-30.4/contact) +
2D Compatibility (PS) -8518 + (NN) 3846 + (LL) 368
1D Compatibility (HY) 0 + (ID) 650
Total energy: -21811.0 ( -39.37 by residue)
QMean score : 0.251
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