Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GETRWAEAAVTCNPIELIP-CLAAVMSSTPPSE--TCCSRLREQTPCFCGYLNDPSLRQFADNPIIRTV--GNACGVAYPQC------
2KSS Chain:A ((21-106))
--MIQDPSLIICHDVDGAPVRIGAKVKVVPHSEDGTISQRFLGQTGIVVGLVFDDPATQYPDDPLIQVLVEGLGEDLFFPEELELAPE
General information:
TITO was launched using:
RESULT:
Template:
2KSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29608 for 421 contacts (-70.3/contact) +
2D Compatibility (PS) -8124 + (NN) -5955 + (LL) -68
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -48255.0 ( -114.62 by residue)
QMean score : 0.163
(partial model without unconserved sides chains):
PDB file :
Tito_2KSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KSS-query.scw
PDB file :
Tito_Scwrl_2KSS.pdb
: