Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VTCSPAQLSSCVSAITSSTPPTNLCCSKIKE-----------QKPCLCQYLKNPKLQKFINTPNARKVASTCGTPFPKC
1BWO Chain:A ((8-78))
-----SLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIH-NLNEDNARSIPPKCGVNLP--
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8839 for 361 contacts (-24.5/contact) +
2D Compatibility (PS) -6027 + (NN) -2298 + (LL) 316
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -21248.0 ( -58.86 by residue)
QMean score : 0.284
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: