Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------------------TRVESFGEVAQSCVVTELAPCLPAMTLTGDPTTECCDKLVEQKPCLCGYIRNPAYSMYVTSPNARKVLDFCKVPFPSC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 1YU0 Chain:A ((5-380)) | VQFRGGTTAQHATFTGAAREITVDTDKNTVVVHDGATAGGFPLARHDLVKTAFIKADKSAVAFTRTGNATASIKAGTIVEVNGKLVQFTADTAIT--MPALTAGTDYAIYVCDD-----GTVRADSNFSAPTGY-TSTTARKVGGFHYAPGSNAAAQAGGNTTAQINEYSLWDIKFRPAALDPRGMTLVAGAFWADIYLLGVNHLTDGTSKYNVTIADGSASPKKSTKFGGDGSAAYSDGAWYNFAEVMTHHGKRLPNYNEFQALAFGTTEATSSGGTDVPTTGVNGTGATSAWNIFTSKWGVVQASGCLWTWGNEFGGVNGASEYTANTGGRGSVYAQPAAALFGGAWNGTSLSGSRAALWYSGPSFSFAFFGARGVCDHLIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YU0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12207 for 440 contacts (-27.7/contact) +
2D Compatibility (PS) -7190 + (NN) -2139 + (LL) 764
1D Compatibility (HY) 2000 + (ID) 1100
Total energy: -19872.0 ( -45.16 by residue)
QMean score : 0.133
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