Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQCLDNLSNMQVCAPLVLPGAVNPAPNSNCCIALQATNK----------DCICNALR----------AATTFTTTCNLPSLDCGITI
1BWO Chain:A ((2-76))
-DCGHVDSLVRPCLSYVQGG---PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVN--------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29092 for 353 contacts (-82.4/contact) +
2D Compatibility (PS) -5683 + (NN) -4017 + (LL) 792
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -41050.0 ( -116.29 by residue)
QMean score : 0.177
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: