Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AQTCSASLANLNACAPFVVLGAATTPSSDCCTALQSVDH----------ECLCNTLR----------IASRVPAQCNLPPLSCGAN
1BWO Chain:A ((2-76))
--DCGHVDSLVRPCLSYVQGG--PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVN-------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34193 for 353 contacts (-96.9/contact) +
2D Compatibility (PS) -5588 + (NN) -2892 + (LL) 508
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -46015.0 ( -130.35 by residue)
QMean score : 0.446
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: