Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QNCSAAIGELMTCGPYVLPGNNGAPSEQCCSALRAVNH----------GCLCETIN----------IISSLPDHCSLPAVNCAA
1BWO Chain:A ((2-76))
-DCGHVDSLVRPCLSYVQGG--PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVN------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30752 for 353 contacts (-87.1/contact) +
2D Compatibility (PS) -5877 + (NN) -6212 + (LL) 560
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -45831.0 ( -129.83 by residue)
QMean score : 0.407
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: