Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QTCPSQLNSLNVCAPFVVPGATNTNPNAECCSALQSVEH----------DCLCNTLR----------IAARLPSQCNLAPVNCGNW
1BWO Chain:A ((2-76))
-DCGHVDSLVRPCLSYVQGG---PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVN-------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30349 for 353 contacts (-86.0/contact) +
2D Compatibility (PS) -5746 + (NN) -4709 + (LL) 168
1D Compatibility (HY) -3200 + (ID) 600
Total energy: -44436.0 ( -125.88 by residue)
QMean score : 0.282
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: