Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------------ISCANVA--GMLSSCINYLRNGG----------------------SLPSNCCAGLKSLNTQARNKGIRQAVCRCLQNA--AKTITGLKTNLVEGLPRRCGVKIPYKISTSTNCNRVK
1PSY Chain:A ((1-125))
AEFMESKGEREGSSSQQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQVRDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCG--VRCMRQTRTN-----
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37271 for 630 contacts (-59.2/contact) +
2D Compatibility (PS) -8337 + (NN) 2318 + (LL) 588
1D Compatibility (HY) -800 + (ID) 900
Total energy: -44402.0 ( -70.48 by residue)
QMean score : 0.350
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: